Transcript: ENSDART00000087382.7 ddx6-201

Description

DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]

Gene Synonyms

p54a, si:ch211-147p17.1

Location

About this transcript

This transcript has 14 exons, is annotated with 19 domains and features, is associated with 24 variant alleles and maps to 406 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000185638.1	ddx6-202	6780	484aa	ENSDARP00000149027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FD91	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000087382.7	ddx6-201	5615	484aa	ENSDARP00000081816.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FD91	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 14, Coding exons: 12, Transcript length: 5,615 bps, Translation length: 484 residues

Version

ENSDART00000087382.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.