Transcript: ENSDART00000087040.6 acsf2-201

Description

acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]

Gene Synonyms

im:7145554, wu:fi49b09, zgc:152887

Location

Chromosome 12: 26,497,167-26,537,996 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 10 domains and features, is associated with 618 variant alleles and maps to 204 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061201.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000087040.6	acsf2-201	2625	606aa	ENSDARP00000081474.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1C0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163931.2	acsf2-206	2774	606aa	ENSDARP00000132854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1C0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132737.3	acsf2-202	1050	231aa	ENSDARP00000117994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143213.3	acsf2-204	671	181aa	ENSDARP00000114708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000138437.2	acsf2-203	608	135aa	ENSDARP00000116964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144634.2	acsf2-205	818	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 2,625 bps, Translation length: 606 residues

Version

ENSDART00000087040.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000087040.6 acsf2-201

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Transcript: ENSDART00000087040.6 acsf2-201

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