Transcript: ENSDART00000087023.6 ttc7b-201

Description

tetratricopeptide repeat domain 7B [Source:ZFIN;Acc:ZDB-GENE-070105-3]

Gene Synonyms

wu:fj46e11, zgc:153460

Location

About this transcript

This transcript has 20 exons, is annotated with 24 domains and features, is associated with 1616 variant alleles and maps to 194 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000087023.6	ttc7b-201	3697	844aa	ENSDARP00000081457.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1C9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166450.2	ttc7b-204	5468	816aa	ENSDARP00000132830.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IH06	-
ENSDART00000152037.2	ttc7b-203	400	133aa	ENSDARP00000126545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DYL6	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000140893.2	ttc7b-202	699	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 3,697 bps, Translation length: 844 residues

Version

ENSDART00000087023.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.