Transcript: ENSDART00000086281.6 mavs-201

Description

mitochondrial antiviral signaling protein [Source:ZFIN;Acc:ZDB-GENE-070112-1402]

Gene Synonyms

wu:fj20d04, zgc:158392

Location

Chromosome 13: 15,182,211-15,213,581 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 240 variant alleles and maps to 284 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000069733.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000086281.6	mavs-201	4397	364aa	ENSDARP00000080716.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4W7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000193644.1	mavs-206	4559	585aa	ENSDARP00000150370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1REK4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000129045.3	mavs-202	4108	585aa	ENSDARP00000112479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1REK4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000134421.3	mavs-203	790	219aa	ENSDARP00000119203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142240.2	mavs-205	744	239aa	ENSDARP00000122241.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135100.3	mavs-204	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 4,397 bps, Translation length: 364 residues

Version

ENSDART00000086281.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000086281.6 mavs-201

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Transcript: ENSDART00000086281.6 mavs-201

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