Transcript: ENSDART00000086201.5 ush2a-201

Description

Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]

Gene Synonyms

si:ch211-279e11.1

Location

About this transcript

This transcript has 72 exons, is annotated with 306 domains and features, is associated with 9120 variant alleles and maps to 434 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000086201.5	ush2a-201	15711	5236aa	ENSDARP00000080636.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1MTD2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183483.1	ush2a-202	587	117aa	ENSDARP00000154971.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QIG1	-

Summary

Statistics

Exons: 72, Coding exons: 72, Transcript length: 15,711 bps, Translation length: 5,236 residues

Version

ENSDART00000086201.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.