Transcript: ENSDART00000085228.6 pik3r4-201

Description

phosphoinositide-3-kinase, regulatory subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050309-84]

Gene Synonyms

im:7148788, vps15

Location

Chromosome 16: 36,721,627-36,746,837 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 32 domains and features, is associated with 93 variant alleles and maps to 269 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000060469.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000085228.6	pik3r4-201	4086	1347aa	ENSDARP00000079663.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PN73	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000133310.3	pik3r4-202	4641	1340aa	ENSDARP00000115670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFS6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000189276.1	pik3r4-203	4065	1340aa	ENSDARP00000153368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFS6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 4,086 bps, Translation length: 1,347 residues

Version

ENSDART00000085228.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000085228.6 pik3r4-201

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Transcript: ENSDART00000085228.6 pik3r4-201

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