Transcript: ENSDART00000084871.6 fam20cl-201

Description

family with sequence similarity 20 member C, like [Source:ZFIN;Acc:ZDB-GENE-070705-319]

Gene Synonyms

fam20c3, si:dkey-179j5.2, si:dkey-4c23.6

Location

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 221 variant alleles and maps to 124 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000084871.6	fam20cl-201	1712	507aa	ENSDARP00000079306.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1MTC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153490.3	fam20cl-202	1524	507aa	ENSDARP00000128153.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1MTC0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,712 bps, Translation length: 507 residues

Version

ENSDART00000084871.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.