Transcript: ENSDART00000083928.6 c1qtnf2-201

Description

C1q and TNF related 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5133]

Gene Synonyms

fe50b04, wu:fe50b04

Location

About this transcript

This transcript has 3 exons, is annotated with 26 domains and features, is associated with 297 variant alleles and maps to 139 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000190087.1	c1qtnf2-203	4933	292aa	ENSDARP00000149953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6Z0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000083928.6	c1qtnf2-201	1246	292aa	ENSDARP00000078363.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6Z0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157617.2	c1qtnf2-202	459	80aa	ENSDARP00000135361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,246 bps, Translation length: 292 residues

Version

ENSDART00000083928.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.