Transcript: ENSDART00000083807.7 cbfa2t2-201

Description

CBFA2/RUNX1 partner transcriptional co-repressor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]

Gene Synonyms

mtgr1, sb:cb451, si:dkey-221l21.2, zgc:153702

Location

About this transcript

This transcript has 10 exons, is annotated with 33 domains and features, is associated with 7 variant alleles and maps to 211 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000083807.7	cbfa2t2-201	2357	561aa	ENSDARP00000078242.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186163.1	cbfa2t2-204	815	171aa	ENSDARP00000156695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08C32	-
ENSDART00000155438.2	cbfa2t2-202	735	153aa	ENSDARP00000128623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000168708.3	cbfa2t2-203	423	140aa	ENSDARP00000135617.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,357 bps, Translation length: 561 residues

Version

ENSDART00000083807.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.