Transcript: ENSDART00000083555.7 sin3ab-201

Description

SIN3 transcription regulator family member A [Source:HGNC Symbol;Acc:HGNC:19353]

Location

Chromosome 7: 48,347,290-48,396,193 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 33 domains and features, is associated with 1176 variant alleles and maps to 293 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000059812.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000180034.1	sin3ab-204	6698	1262aa	ENSDARP00000149185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F0R9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000083555.7	sin3ab-201	5330	1262aa	ENSDARP00000077990.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F0R9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174221.2	sin3ab-202	1598	204aa	ENSDARP00000143146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000174381.2	sin3ab-203	687	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 5,330 bps, Translation length: 1,262 residues

Version

ENSDART00000083555.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000083555.7 sin3ab-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000083555.7 sin3ab-201

Summary

About Us

Get help

Our sister sites

Follow us