Transcript: ENSDART00000083539.6 SIN3A-201

Description

SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]

Location

About this transcript

This transcript has 21 exons, is annotated with 39 domains and features, is associated with 24 variant alleles and maps to 269 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000083539.6	SIN3A-201	5189	1276aa	ENSDARP00000077974.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5D6S0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138782.2	SIN3A-202	357	95aa	ENSDARP00000115323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 5,189 bps, Translation length: 1,276 residues

Version

ENSDART00000083539.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.