Transcript: ENSDART00000083340.5 ubac1-201

Description

UBA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9372]

Gene Synonyms

fj67a11, si:dkey-1o2.1, si:dkey-5f20.1, wu:fj67a11

Location

About this transcript

This transcript has 10 exons, is annotated with 24 domains and features, is associated with 518 variant alleles and maps to 309 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000083340.5	ubac1-201	4974	415aa	ENSDARP00000077775.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JTG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000138210.3	ubac1-202	5216	413aa	ENSDARP00000115260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TPM0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,974 bps, Translation length: 415 residues

Version

ENSDART00000083340.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.