Transcript: ENSDART00000082920.6 si:ch73-281f12.4-201

Description

si:ch73-281f12.4 [Source:ZFIN;Acc:ZDB-GENE-130530-682]

Gene Synonyms

zmp:0000000679

Location

About this transcript

This transcript has 11 exons, is annotated with 24 domains and features, is associated with 1991 variant alleles and maps to 109 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161248.2	si:ch73-281f12.4-203	3748	1144aa	ENSDARP00000133527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000082920.6	si:ch73-281f12.4-201	2986	849aa	ENSDARP00000077355.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F1M9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000154603.3	si:ch73-281f12.4-202	1361	296aa	ENSDARP00000127833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WC90	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,986 bps, Translation length: 849 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000082920.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.