Transcript: ENSDART00000082603.5 fktn-201

Description

fukutin [Source:ZFIN;Acc:ZDB-GENE-070410-96]

Gene Synonyms

fcmd, im:7163166, zgc:162828

Location

About this transcript

This transcript has 10 exons, is annotated with 6 domains and features, is associated with 476 variant alleles and maps to 112 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000082603.5	fktn-201	2367	457aa	ENSDARP00000077038.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JMA5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187389.1	fktn-203	1432	457aa	ENSDARP00000147341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JMA5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000128069.3	fktn-202	503	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,367 bps, Translation length: 457 residues

Version

ENSDART00000082603.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.