Transcript: ENSDART00000082467.6 cavin1b-201

Description

caveolae associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5509]

Gene Synonyms

fd20g07, ptrf, ptrfb, wu:fd20g07, zgc:162917

Location

About this transcript

This transcript has 2 exons, is annotated with 19 domains and features, is associated with 14 variant alleles and maps to 195 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000082467.6	cavin1b-201	1432	454aa	ENSDARP00000076902.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6NA21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187464.1	cavin1b-203	2298	454aa	ENSDARP00000151250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6NA21	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000124409.3	cavin1b-202	1307	177aa	ENSDARP00000105965.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,432 bps, Translation length: 454 residues

Version

ENSDART00000082467.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.