Transcript: ENSDART00000082251.7 SPDYA-205

Description

speedy/RINGO cell cycle regulator family member A [Source:ZFIN;Acc:ZDB-GENE-041010-194]

Location

Chromosome 17: 24,809,221-24,815,220 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 422 variant alleles and maps to 169 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000059131.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000082251.7	SPDYA-205	1311	289aa	ENSDARP00000076688.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWB8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130871.3	SPDYA-206	1414	289aa	ENSDARP00000105848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWB8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147871.3	SPDYA-201	939	228aa	ENSDARP00000120191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135986.2	SPDYA-204	936	271aa	ENSDARP00000117943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000135282.2	SPDYA-202	737	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000141327.2	SPDYA-203	696	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,311 bps, Translation length: 289 residues

Version

ENSDART00000082251.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000082251.7 SPDYA-205

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Transcript: ENSDART00000082251.7 SPDYA-205

Summary

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