Transcript: ENSDART00000082063.7 fam114a1-201

Description

family with sequence similarity 114 member A1 [Source:ZFIN;Acc:ZDB-GENE-070410-52]

Gene Synonyms

zgc:162266

Location

About this transcript

This transcript has 13 exons, is annotated with 15 domains and features, is associated with 626 variant alleles and maps to 122 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000082063.7	fam114a1-201	2234	546aa	ENSDARP00000076500.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JI33	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147228.2	fam114a1-203	760	254aa	ENSDARP00000119107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4J9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000131548.2	fam114a1-202	465	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,234 bps, Translation length: 546 residues

Version

ENSDART00000082063.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.