Transcript: ENSDART00000081966.5 rtn4a-202

Description

reticulon 4a [Source:ZFIN;Acc:ZDB-GENE-030710-1]

Gene Synonyms

Nogo-B, nogo, rtn4, wu:fb17a02, wu:fb22f12, wu:fd61a07, zgc:92163

Location

About this transcript

This transcript has 7 exons, is annotated with 21 domains and features, is associated with 249 variant alleles and maps to 266 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081966.5	rtn4a-202	2138	322aa	ENSDARP00000076404.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4G5W2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000081952.6	rtn4a-201	2079	212aa	ENSDARP00000076390.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4G5V9	-
ENSDART00000125918.4	rtn4a-204	1887	254aa	ENSDARP00000106859.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000124662.4	rtn4a-203	1647	196aa	ENSDARP00000108083.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QT89	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132350.2	rtn4a-205	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,138 bps, Translation length: 322 residues

Version

ENSDART00000081966.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.