Transcript: ENSDART00000081896.5 si:busm1-52i16.2-201

Description

si:busm1-52i16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-509]

Gene Synonyms

claudin, si:dz52i16.2

Location

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 275 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158065.2	si:busm1-52i16.2-202	951	316aa	ENSDARP00000138844.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IRK7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000081896.5	si:busm1-52i16.2-201	558	186aa	ENSDARP00000076335.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWI7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 558 bps, Translation length: 186 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000081896.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.