Transcript: ENSDART00000081797.6 sash1b-201

Description

SAM and SH3 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-110228-1]

Location

Chromosome 17: 6,985,428-7,060,477 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 45 domains and features, is associated with 2155 variant alleles and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000058853.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081797.6	sash1b-201	6070	1032aa	ENSDARP00000076236.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000188305.1	sash1b-203	6151	944aa	ENSDARP00000152195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000187895.1	sash1b-202	5978	922aa	ENSDARP00000155178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 6,070 bps, Translation length: 1,032 residues

Version

ENSDART00000081797.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000081797.6 sash1b-201

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Transcript: ENSDART00000081797.6 sash1b-201

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