Transcript: ENSDART00000081772.5 susd1-202

Description

sushi domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-169]

Location

About this transcript

This transcript has 19 exons, is annotated with 71 domains and features, is associated with 1314 variant alleles and maps to 251 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081772.5	susd1-202	3483	921aa	ENSDARP00000076211.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183189.1	susd1-204	2961	561aa	ENSDARP00000146487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000081769.5	susd1-201	2662	575aa	ENSDARP00000076208.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRX3	-
ENSDART00000185560.1	susd1-205	2194	490aa	ENSDARP00000144652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000163060.2	susd1-203	853	284aa	ENSDARP00000141004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 3,483 bps, Translation length: 921 residues

Version

ENSDART00000081772.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

RNA-Seq supported partial