Transcript: ENSDART00000081350.6 slc9a3.1-201

Description

solute carrier family 9 member A3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]

Location

About this transcript

This transcript has 18 exons, is annotated with 1 domain and feature, is associated with 680 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000126033.5	slc9a3.1-202	3398	832aa	ENSDARP00000107289.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZVJ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000081350.6	slc9a3.1-201	3645	832aa	ENSDARP00000075793.4	Nonsense mediated decay	B7ZVJ6	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,645 bps, Translation length: 832 residues

Version

ENSDART00000081350.6

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.