Transcript: ENSDART00000081326.5 prpf40a-201

Description

PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]

Gene Synonyms

fb18h07, fe47a12, fnbp3, wu:fb18h07, wu:fe47a12

Location

About this transcript

This transcript has 26 exons, is annotated with 71 domains and features, is associated with 1686 variant alleles and maps to 199 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081326.5	prpf40a-201	3285	851aa	ENSDARP00000075769.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZUE4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 3,285 bps, Translation length: 851 residues

Version

ENSDART00000081326.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.