Transcript: ENSDART00000081143.6 SEPHS1-201

Description

selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]

Location

About this transcript

This transcript has 9 exons, is annotated with 11 domains and features, is associated with 358 variant alleles and maps to 198 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081143.6	SEPHS1-201	2113	392aa	ENSDARP00000075586.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZW38	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192807.1	SEPHS1-203	1182	392aa	ENSDARP00000148109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZW38	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141581.2	SEPHS1-202	717	186aa	ENSDARP00000121969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,113 bps, Translation length: 392 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7ZW38

Version

ENSDART00000081143.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.