Transcript: ENSDART00000081038.5 ndnl2-201

Description

necdin-like 2 [Source:ZFIN;Acc:ZDB-GENE-031107-3]

Gene Synonyms

mage, zgc:101850

Location

Chromosome 23: 12,900,424-12,913,131 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 8 domains and features, is associated with 30 variant alleles and maps to 161 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000058212.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081038.5	ndnl2-201	1084	260aa	ENSDARP00000075481.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T0K5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185095.1	ndnl2-204	3549	260aa	ENSDARP00000157669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T0K5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138807.3	ndnl2-203	1580	120aa	ENSDARP00000121107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000123043.3	ndnl2-202	870	220aa	ENSDARP00000107600.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,084 bps, Translation length: 260 residues

Version

ENSDART00000081038.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000081038.5 ndnl2-201

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Transcript: ENSDART00000081038.5 ndnl2-201

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