Transcript: ENSDART00000080864.6 MAGT1-204

Description

magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]

Location

About this transcript

This transcript has 10 exons, is annotated with 25 domains and features, is associated with 38 variant alleles and maps to 178 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000080864.6	MAGT1-204	1639	328aa	ENSDARP00000075309.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZV50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131343.2	MAGT1-202	531	131aa	ENSDARP00000115114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000106641.4	MAGT1-203	801	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000147664.3	MAGT1-201	481	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,639 bps, Translation length: 328 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7ZV50

Version

ENSDART00000080864.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.