Transcript: ENSDART00000080661.5 si:ch211-266g18.10-201

Description

si:ch211-266g18.10 [Source:ZFIN;Acc:ZDB-GENE-131127-188]

Gene Synonyms

zmp:0000000669

Location

About this transcript

This transcript has 16 exons, is annotated with 6 domains and features, is associated with 765 variant alleles and maps to 84 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000156905.3	si:ch211-266g18.10-203	6481	2046aa	ENSDARP00000127873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000080661.5	si:ch211-266g18.10-201	2004	579aa	ENSDARP00000075107.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000154607.2	si:ch211-266g18.10-202	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,004 bps, Translation length: 579 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000080661.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.