Transcript: ENSDART00000080487.6 hgd-201

Description

homogentisate 1,2-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-020802-5]

Location

About this transcript

This transcript has 13 exons, is annotated with 9 domains and features, is associated with 386 variant alleles and maps to 223 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000080487.6	hgd-201	1637	443aa	ENSDARP00000074936.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P2V4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180036.1	hgd-202	6190	472aa	ENSDARP00000147060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,637 bps, Translation length: 443 residues

Version

ENSDART00000080487.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.