Transcript: ENSDART00000080395.6 golga7-201

Description

golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]

Location

Chromosome 10: 20,364,155-20,372,142 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 361 variant alleles and maps to 116 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057676.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000080395.6	golga7-201	1599	143aa	ENSDARP00000074845.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E5H4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186139.1	golga7-207	3034	143aa	ENSDARP00000154479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E5H4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131745.3	golga7-202	988	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000145962.2	golga7-205	910	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000141525.3	golga7-204	839	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000139022.3	golga7-203	795	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000146243.2	golga7-206	808	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,599 bps, Translation length: 143 residues

Version

ENSDART00000080395.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000080395.6 golga7-201

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Transcript: ENSDART00000080395.6 golga7-201

Summary

About Us

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