Transcript: ENSDART00000080039.5 lrrc31-201

Description

leucine rich repeat containing 31 [Source:ZFIN;Acc:ZDB-GENE-091204-286]

Location

About this transcript

This transcript has 10 exons, is annotated with 20 domains and features, is associated with 588 variant alleles and maps to 128 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000080039.5	lrrc31-201	1880	520aa	ENSDARP00000138735.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143411.3	lrrc31-202	654	134aa	ENSDARP00000130870.1	Nonsense mediated decay	-
ENSDART00000146396.2	lrrc31-203	538	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,880 bps, Translation length: 520 residues

Version

ENSDART00000080039.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]