Transcript: ENSDART00000080006.5 elovl8b-201

Description

ELOVL fatty acid elongase 8b [Source:ZFIN;Acc:ZDB-GENE-050522-453]

Gene Synonyms

im:7139490, zgc:112263

Location

Chromosome 8: 18,200,333-18,203,303 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 25 domains and features, is associated with 374 variant alleles and maps to 183 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057365.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142114.3	elovl8b-206	1289	264aa	ENSDARP00000123230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JJK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125418.3	elovl8b-202	1268	264aa	ENSDARP00000107017.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JJK4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000080006.5	elovl8b-201	1243	264aa	ENSDARP00000074456.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JJK4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180235.1	elovl8b-207	1232	254aa	ENSDARP00000148979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000140620.3	elovl8b-205	732	185aa	ENSDARP00000114367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134078.2	elovl8b-203	477	110aa	ENSDARP00000117488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137005.2	elovl8b-204	882	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,243 bps, Translation length: 264 residues

Version

ENSDART00000080006.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000080006.5 elovl8b-201

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Transcript: ENSDART00000080006.5 elovl8b-201

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