Transcript: ENSDART00000079638.7 tm2d1-201

Description

TM2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-580]

Location

About this transcript

This transcript has 7 exons, is annotated with 17 domains and features, is associated with 340 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079638.7	tm2d1-201	1033	197aa	ENSDARP00000074090.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PLH4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000113099.3	tm2d1-202	1032	197aa	ENSDARP00000100423.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PLH4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,033 bps, Translation length: 197 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A5PLH4

Version

ENSDART00000079638.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.