Transcript: ENSDART00000079194.6 arfip2b-201

Description

ADP-ribosylation factor interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-050417-131]

Gene Synonyms

im:7136059, zgc:112066

Location

About this transcript

This transcript has 9 exons, is annotated with 12 domains and features, is associated with 344 variant alleles and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079194.6	arfip2b-201	1749	355aa	ENSDARP00000073650.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q567G5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180764.1	arfip2b-203	1096	355aa	ENSDARP00000146265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q567G5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132019.2	arfip2b-202	639	140aa	ENSDARP00000116569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,749 bps, Translation length: 355 residues

Version

ENSDART00000079194.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.