Transcript: ENSDART00000079175.6 zgc:113276-201

Description

zgc:113276 [Source:ZFIN;Acc:ZDB-GENE-050522-7]

Location

About this transcript

This transcript has 9 exons, is annotated with 7 domains and features, is associated with 131 variant alleles and maps to 145 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000165182.2	zgc:113276-203	1899	547aa	ENSDARP00000134493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QD38	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000079175.6	zgc:113276-201	1699	513aa	ENSDARP00000073631.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000135699.2	zgc:113276-202	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,699 bps, Translation length: 513 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000079175.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.