Transcript: ENSDART00000079145.5 arhgap42a-201

Description

Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]

Gene Synonyms

fj51b01, si:rp71-1p14.10, wu:fj51b01

Location

About this transcript

This transcript has 23 exons, is annotated with 33 domains and features, is associated with 1032 variant alleles and maps to 234 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151342.3	arhgap42a-203	3948	880aa	ENSDARP00000126225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ITG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000079145.5	arhgap42a-201	3880	818aa	ENSDARP00000073601.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151241.2	arhgap42a-202	676	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,880 bps, Translation length: 818 residues

Version

ENSDART00000079145.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.