Transcript: ENSDART00000079112.6 calca-201

Description

calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]

Gene Synonyms

calc, calcitonin, cgrp, zgc:92886

Location

Chromosome 7: 27,680,556-27,686,021 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 18 domains and features, is associated with 141 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000056590.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079112.6	calca-201	1065	126aa	ENSDARP00000073567.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGJ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000100989.5	calca-202	804	133aa	ENSDARP00000091761.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QIK6	-
ENSDART00000173470.2	calca-203	779	133aa	ENSDARP00000142837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QIK6	-
ENSDART00000188342.1	calca-204	387	126aa	ENSDARP00000146756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGJ9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 1,065 bps, Translation length: 126 residues

Version

ENSDART00000079112.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000079112.6 calca-201

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Transcript: ENSDART00000079112.6 calca-201

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