Transcript: ENSDART00000079064.5 TANGO2-201

Description

transport and golgi organization 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040808-42]

Location

About this transcript

This transcript has 9 exons, is annotated with 4 domains and features, is associated with 1108 variant alleles and maps to 188 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079064.5	TANGO2-201	2331	273aa	ENSDARP00000073519.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AXK1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000193543.1	TANGO2-202	6238	274aa	ENSDARP00000153743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2BJ62	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,331 bps, Translation length: 273 residues

Version

ENSDART00000079064.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.