Transcript: ENSDART00000079014.5 pdik1l-201

Description

PDLIM1 interacting kinase 1 like [Source:ZFIN;Acc:ZDB-GENE-051113-236]

Gene Synonyms

wu:fc95a02, zgc:123209

Location

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features, is associated with 33 variant alleles and maps to 288 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079014.5	pdik1l-201	2796	341aa	ENSDARP00000073471.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WV55	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182797.1	pdik1l-203	3254	341aa	ENSDARP00000147587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WV55	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151530.2	pdik1l-202	366	26aa	ENSDARP00000126211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,796 bps, Translation length: 341 residues

Version

ENSDART00000079014.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.