Transcript: ENSDART00000079012.6 RAD52-201

Description

RAD52 homolog, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-050731-10]

Location

Chromosome 25: 21,098,675-21,115,213 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features, is associated with 593 variant alleles and maps to 214 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000005274.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079012.6	RAD52-201	1819	434aa	ENSDARP00000073469.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000017488.8	RAD52-202	1248	409aa	ENSDARP00000016632.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000149733.2	RAD52-203	833	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,819 bps, Translation length: 434 residues

Version

ENSDART00000079012.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000079012.6 RAD52-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000079012.6 RAD52-201

Summary

About Us

Get help

Our sister sites

Follow us