Transcript: ENSDART00000079007.7 CA6-204

Description

carbonic anhydrase VI [Source:ZFIN;Acc:ZDB-GENE-030131-7091]

Location

Chromosome 23: 22,634,442-22,650,992 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 24 domains and features, is associated with 454 variant alleles and maps to 134 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000056499.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132733.3	CA6-201	1965	530aa	ENSDARP00000119189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QB97	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000079007.7	CA6-204	2804	538aa	ENSDARP00000073464.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3ANQ1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000141127.2	CA6-203	684	159aa	ENSDARP00000116292.1	Nonsense mediated decay	-	-
ENSDART00000139717.2	CA6-202	574	144aa	ENSDARP00000119898.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,804 bps, Translation length: 538 residues

Version

ENSDART00000079007.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000079007.7 CA6-204

Summary

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Transcript: ENSDART00000079007.7 CA6-204

Summary

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