Transcript: ENSDART00000078998.6 crp2-202

Description

C-reactive protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5826]

Gene Synonyms

CRP-like, PTX2, si:ch211-234p6.13, wu:fi20c07

Location

About this transcript

This transcript has 2 exons, is annotated with 7 domains and features, is associated with 288 variant alleles and maps to 282 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000056381.5	crp2-201	822	222aa	ENSDARP00000056380.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SZ53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000078998.6	crp2-202	113	35aa	ENSDARP00000073455.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 113 bps, Translation length: 35 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000078998.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]