Transcript: ENSDART00000078824.5 SZRD1-201

Description

SUZ RNA binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-55]

Gene Synonyms

wu:fb15h05, wu:fk86c07, zgc:109926

Location

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 344 variant alleles and maps to 198 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078824.5	SZRD1-201	2131	161aa	ENSDARP00000073284.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q504E7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136948.2	SZRD1-202	688	55aa	ENSDARP00000123839.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,131 bps, Translation length: 161 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q504E7

Version

ENSDART00000078824.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.