Transcript: ENSDART00000078804.6 si:dkey-78l4.5-201

Description

si:dkey-78l4.5 [Source:ZFIN;Acc:ZDB-GENE-060503-930]

Location

Chromosome 22: 19,425,725-19,428,719 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 19 domains and features, is associated with 196 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000071310.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000078804.6	si:dkey-78l4.5-201	783	261aa	ENSDARP00000073265.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000187531.1	si:dkey-78l4.5-202	1183	183aa	ENSDARP00000154003.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192750.1	si:dkey-78l4.5-203	1107	183aa	ENSDARP00000147111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 783 bps, Translation length: 261 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000078804.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000078804.6 si:dkey-78l4.5-201

Summary

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Transcript: ENSDART00000078804.6 si:dkey-78l4.5-201

Summary

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