Transcript: ENSDART00000078724.6 atpaf2-201

Description

ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18]

Gene Synonyms

im:6893748

Location

Chromosome 12: 18,410,608-18,414,539 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 6 domains and features, is associated with 379 variant alleles and maps to 238 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000056270.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078724.6	atpaf2-201	1445	291aa	ENSDARP00000073185.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KP55	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132956.2	atpaf2-202	726	147aa	ENSDARP00000120415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145024.2	atpaf2-205	996	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000134297.2	atpaf2-203	883	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000139407.3	atpaf2-204	748	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,445 bps, Translation length: 291 residues

Version

ENSDART00000078724.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000078724.6 atpaf2-201

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Transcript: ENSDART00000078724.6 atpaf2-201

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