Transcript: ENSDART00000078494.5 l3mbtl2-201

Description

L3MBTL histone methyl-lysine binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8713]

Gene Synonyms

im:7137244, wu:fb04e09, zgc:66491

Location

Chromosome 12: 18,970,893-18,988,496 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 43 domains and features, is associated with 517 variant alleles and maps to 207 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000056079.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078494.5	l3mbtl2-201	3164	805aa	ENSDARP00000072956.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4V8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164212.3	l3mbtl2-204	5771	805aa	ENSDARP00000134087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4V8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153235.3	l3mbtl2-202	1157	355aa	ENSDARP00000127262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153279.3	l3mbtl2-203	959	273aa	ENSDARP00000127192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,164 bps, Translation length: 805 residues

Version

ENSDART00000078494.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000078494.5 l3mbtl2-201

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Transcript: ENSDART00000078494.5 l3mbtl2-201

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