Transcript: ENSDART00000078412.5 RPS8-206

Description

ribosomal protein S8a [Source:ZFIN;Acc:ZDB-GENE-030131-8626]

Location

Chromosome 2: 26,498,446-26,501,868 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 177 variant alleles and maps to 184 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055996.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078412.5	RPS8-206	1003	208aa	ENSDARP00000072874.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P62247	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141010.3	RPS8-202	830	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000148010.2	RPS8-204	783	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000136937.3	RPS8-203	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000131292.3	RPS8-201	762	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000146173.2	RPS8-205	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,003 bps, Translation length: 208 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62247

Version

ENSDART00000078412.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000078412.5 RPS8-206

Summary

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Transcript: ENSDART00000078412.5 RPS8-206

Summary

About Us

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