Transcript: ENSDART00000078334.6 celsr3-201

Description

cadherin, EGF LAG seven-pass G-type receptor 3 [Source:ZFIN;Acc:ZDB-GENE-070122-3]

Location

Chromosome 8: 26,141,680-26,212,523 forward strand.

About this transcript

This transcript has 35 exons, is annotated with 96 domains and features, is associated with 1222 variant alleles and maps to 280 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055825.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145095.3	celsr3-204	6195	2065aa	ENSDARP00000116971.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9C3S7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000078334.6	celsr3-201	6045	2014aa	ENSDARP00000072796.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8J2	-
ENSDART00000131888.2	celsr3-202	1323	441aa	ENSDARP00000116066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R6D5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000137391.2	celsr3-203	1219	407aa	ENSDARP00000116287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R379	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 35, Coding exons: 35, Transcript length: 6,045 bps, Translation length: 2,014 residues

Version

ENSDART00000078334.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000078334.6 celsr3-201

Summary

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Transcript: ENSDART00000078334.6 celsr3-201

Summary

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