Transcript: ENSDART00000078297.5 zgc:153215-201

Description

zgc:153215 [Source:ZFIN;Acc:ZDB-GENE-061103-58]

Gene Synonyms

fe11g10, im:6907990, wu:fe11g10

Location

About this transcript

This transcript has 2 exons, is annotated with 21 domains and features, is associated with 7 variant alleles and maps to 118 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078297.5	zgc:153215-201	2902	523aa	ENSDARP00000072759.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8L0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142102.2	zgc:153215-202	557	151aa	ENSDARP00000118499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIR6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,902 bps, Translation length: 523 residues

Version

ENSDART00000078297.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.