Transcript: ENSDART00000078225.7 vtg5-201

Description

vitellogenin 5 [Source:ZFIN;Acc:ZDB-GENE-001201-4]

Gene Synonyms

si:rp71-23d18.5, vg5, wu:fi49a01, zgc:114012

Location

About this transcript

This transcript has 28 exons, is annotated with 26 domains and features, is associated with 146 variant alleles and maps to 263 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078225.7	vtg5-201	4210	1363aa	ENSDARP00000072687.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2S5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000144619.3	vtg5-203	977	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000145475.2	vtg5-204	833	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000134511.2	vtg5-202	813	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 4,210 bps, Translation length: 1,363 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000078225.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.