Transcript: ENSDART00000078221.6 MGRN1-202

Description

mahogunin, ring finger 1b [Source:ZFIN;Acc:ZDB-GENE-110401-3]

Location

About this transcript

This transcript has 16 exons, is annotated with 14 domains and features, is associated with 1233 variant alleles and maps to 84 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078221.6	MGRN1-202	6560	549aa	ENSDARP00000072683.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000008988.8	MGRN1-201	6604	525aa	ENSDARP00000027196.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QIN7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 6,560 bps, Translation length: 549 residues

Version

ENSDART00000078221.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.